Overview

Teaching: 10 min
Exercises: 0 min

Questions

• How to find the genes present in a genome assembly

Objectives

Genome annotation

$ prokka --kingdom Bacteria --outdir ~/asm_workshop/results/prokka \
	      --genus Escherichia --prefix Ecoli_K12 \
	      --addgenes --species coli --strain K12 --usegenus \
	      ~/asm_workshop/results/ecoli_ont/ont_pilon_polished.fasta

Key Points